Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Gm7809-201ENSMUST00000153199 742 ntBASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
H2afb3S4R1G7 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Gm3890-201ENSMUST00000182416 207 ntBASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb3S4R1G7 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms