Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.57□□□□□ -0.24
AmfrQ9R049 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.57□□□□□ -0.24
AmfrQ9R049 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
AmfrQ9R049 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
AmfrQ9R049 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
AmfrQ9R049 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.57□□□□□ -0.24
AmfrQ9R049 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.57□□□□□ -0.24
AmfrQ9R049 Gm44882-201ENSMUST00000205702 802 ntBASIC13.57□□□□□ -0.24
AmfrQ9R049 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.57□□□□□ -0.24
AmfrQ9R049 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
AmfrQ9R049 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
AmfrQ9R049 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
AmfrQ9R049 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.57□□□□□ -0.24
AmfrQ9R049 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AmfrQ9R049 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
AmfrQ9R049 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.56□□□□□ -0.24
AmfrQ9R049 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
AmfrQ9R049 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Gm23270-201ENSMUST00000104055 131 ntBASIC13.56□□□□□ -0.24
AmfrQ9R049 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.56□□□□□ -0.24
AmfrQ9R049 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Gm11930-201ENSMUST00000117788 190 ntBASIC13.56□□□□□ -0.24
AmfrQ9R049 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Gm25668-201ENSMUST00000157700 129 ntBASIC13.56□□□□□ -0.24
AmfrQ9R049 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
AmfrQ9R049 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.56□□□□□ -0.24
AmfrQ9R049 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Gm27320-201ENSMUST00000184892 109 ntBASIC13.56□□□□□ -0.24
AmfrQ9R049 Gm31256-201ENSMUST00000194705 506 ntBASIC13.56□□□□□ -0.24
AmfrQ9R049 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.56□□□□□ -0.24
AmfrQ9R049 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.56□□□□□ -0.24
AmfrQ9R049 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.56□□□□□ -0.24
AmfrQ9R049 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
AmfrQ9R049 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.56□□□□□ -0.24
AmfrQ9R049 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
AmfrQ9R049 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AmfrQ9R049 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
AmfrQ9R049 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
AmfrQ9R049 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.55□□□□□ -0.24
AmfrQ9R049 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.55□□□□□ -0.24
AmfrQ9R049 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
AmfrQ9R049 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.55□□□□□ -0.24
AmfrQ9R049 Gm37201-201ENSMUST00000191845 523 ntBASIC13.55□□□□□ -0.24
AmfrQ9R049 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.55□□□□□ -0.24
AmfrQ9R049 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.55□□□□□ -0.24
AmfrQ9R049 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.55□□□□□ -0.24
AmfrQ9R049 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.55□□□□□ -0.24
AmfrQ9R049 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 2635.4 ms