Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Gm12501-201ENSMUST00000119163 529 ntBASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Gm8566-201ENSMUST00000120174 465 ntBASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Gm5733-201ENSMUST00000190232 939 ntBASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Gm43138-201ENSMUST00000199123 708 ntBASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3bQ9ES34 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Gm8100-201ENSMUST00000182906 988 ntBASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 AC151275.1-201ENSMUST00000224870 585 ntBASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.4□□□□□ -0.1
Ube3bQ9ES34 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube3bQ9ES34 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.4□□□□□ -0.11
Ube3bQ9ES34 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Ube3bQ9ES34 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Gm14058-201ENSMUST00000116082 735 ntBASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Gm7851-201ENSMUST00000117574 323 ntBASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Gm23085-201ENSMUST00000157849 293 ntBASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Gm28686-201ENSMUST00000187404 609 ntBASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Gm2965-201ENSMUST00000198365 343 ntBASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Gm18753-201ENSMUST00000201000 566 ntBASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Gm19287-201ENSMUST00000203190 358 ntBASIC14.39□□□□□ -0.11
Ube3bQ9ES34 AC114573.1-201ENSMUST00000224120 1210 ntBASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube3bQ9ES34 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 116.8 ms