Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gm4705-201ENSMUST00000177415 354 ntBASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Mir7035-201ENSMUST00000184713 82 ntBASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Gm42751-201ENSMUST00000198065 559 ntBASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Gm43117-201ENSMUST00000198531 379 ntBASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Gm43106-201ENSMUST00000199485 637 ntBASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Gm7242-201ENSMUST00000221134 705 ntBASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 AC118639.1-202ENSMUST00000226957 653 ntBASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lysmd1Q9D0E3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Lysmd1Q9D0E3 Gm13456-201ENSMUST00000118928 1365 ntBASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Gm15197-201ENSMUST00000120526 478 ntBASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Gm7805-201ENSMUST00000154348 448 ntBASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Gm23582-201ENSMUST00000158530 139 ntBASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Gm8459-201ENSMUST00000162504 760 ntBASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Gm7741-201ENSMUST00000181445 989 ntBASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Gm27444-201ENSMUST00000184157 137 ntBASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Gm8197-202ENSMUST00000193422 934 ntBASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 AC124613.1-201ENSMUST00000198711 88 ntBASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 AC102847.1-202ENSMUST00000226313 1245 ntBASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Gm5468-202ENSMUST00000227851 682 ntBASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Gm5507-201ENSMUST00000091897 1008 ntBASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 AC022682.1-201ENSMUST00000224624 2023 ntBASIC12.83□□□□□ -0.36
Lysmd1Q9D0E3 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd1Q9D0E3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd1Q9D0E3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd1Q9D0E3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd1Q9D0E3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd1Q9D0E3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd1Q9D0E3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd1Q9D0E3 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Lysmd1Q9D0E3 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Lysmd1Q9D0E3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd1Q9D0E3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd1Q9D0E3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd1Q9D0E3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd1Q9D0E3 Gm13426-201ENSMUST00000117887 795 ntBASIC12.82□□□□□ -0.36
Lysmd1Q9D0E3 Gm1826-201ENSMUST00000118646 1162 ntBASIC12.82□□□□□ -0.36
Lysmd1Q9D0E3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 171.5 ms