Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm26272-201ENSMUST00000179241 132 ntBASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Gm18035-201ENSMUST00000211962 589 ntBASIC11.98□□□□□ -0.49
Cdh23Q99PF4 CT025603.1-201ENSMUST00000224040 448 ntBASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 AC117769.1-201ENSMUST00000224716 1120 ntBASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Gm26035-201ENSMUST00000083065 308 ntBASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cdh23Q99PF4 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.97□□□□□ -0.49
Cdh23Q99PF4 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Gm30055-201ENSMUST00000203175 803 ntBASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh23Q99PF4 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Gm2474-201ENSMUST00000195162 559 ntBASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Gm9487-201ENSMUST00000216600 472 ntBASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Cdh23Q99PF4 AC154354.1-203ENSMUST00000225565 1364 ntBASIC11.96□□□□□ -0.49
Cdh23Q99PF4 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh23Q99PF4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh23Q99PF4 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh23Q99PF4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh23Q99PF4 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Cdh23Q99PF4 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC11.96□□□□□ -0.5
Cdh23Q99PF4 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.96□□□□□ -0.5
Cdh23Q99PF4 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh23Q99PF4 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh23Q99PF4 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.96□□□□□ -0.5
Cdh23Q99PF4 Gm17936-201ENSMUST00000199413 988 ntBASIC11.96□□□□□ -0.5
Cdh23Q99PF4 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.96□□□□□ -0.5
Cdh23Q99PF4 Gm42689-201ENSMUST00000202403 404 ntBASIC11.96□□□□□ -0.5
Cdh23Q99PF4 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms