Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Krtap13-201ENSMUST00000053149 882 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rtn4Q99P72 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.18
Rtn4Q99P72 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Gm14746-201ENSMUST00000120309 741 ntBASIC16.14■□□□□ 0.17
Rtn4Q99P72 Gm14612-201ENSMUST00000121522 881 ntBASIC16.14■□□□□ 0.17
Rtn4Q99P72 Gm6161-201ENSMUST00000121942 1102 ntBASIC16.14■□□□□ 0.17
Rtn4Q99P72 Gm14905-201ENSMUST00000122351 639 ntBASIC16.14■□□□□ 0.17
Rtn4Q99P72 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Gm6254-201ENSMUST00000168178 1072 ntBASIC16.14■□□□□ 0.17
Rtn4Q99P72 Gm5778-201ENSMUST00000171003 1072 ntBASIC16.14■□□□□ 0.17
Rtn4Q99P72 Gm6153-201ENSMUST00000172004 1058 ntBASIC16.14■□□□□ 0.17
Rtn4Q99P72 Gm3715-201ENSMUST00000172308 617 ntBASIC16.14■□□□□ 0.17
Rtn4Q99P72 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rtn4Q99P72 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Gm38158-201ENSMUST00000194617 339 ntBASIC16.14■□□□□ 0.17
Rtn4Q99P72 Gm5641-202ENSMUST00000198699 1080 ntBASIC16.14■□□□□ 0.17
Rtn4Q99P72 Gm2691-201ENSMUST00000203205 901 ntBASIC16.14■□□□□ 0.17
Rtn4Q99P72 AC164629.1-201ENSMUST00000220250 1113 ntBASIC16.14■□□□□ 0.17
Rtn4Q99P72 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Rtn4Q99P72 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Gm12502-201ENSMUST00000120197 444 ntBASIC16.13■□□□□ 0.17
Rtn4Q99P72 Gm14253-201ENSMUST00000122112 639 ntBASIC16.13■□□□□ 0.17
Rtn4Q99P72 Gm12885-201ENSMUST00000122246 328 ntBASIC16.13■□□□□ 0.17
Rtn4Q99P72 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC16.13■□□□□ 0.17
Rtn4Q99P72 Gm3890-201ENSMUST00000182416 207 ntBASIC16.13■□□□□ 0.17
Rtn4Q99P72 Ighv1-62-201ENSMUST00000193406 350 ntBASIC16.13■□□□□ 0.17
Rtn4Q99P72 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC16.13■□□□□ 0.17
Rtn4Q99P72 Gm21461-201ENSMUST00000200382 863 ntBASIC16.13■□□□□ 0.17
Rtn4Q99P72 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC16.13■□□□□ 0.17
Rtn4Q99P72 Gm4768-201ENSMUST00000206199 686 ntBASIC16.13■□□□□ 0.17
Rtn4Q99P72 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Rtn4Q99P72 AC164612.2-201ENSMUST00000215737 719 ntTSL 5 BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Gm18242-201ENSMUST00000218455 542 ntBASIC16.13■□□□□ 0.17
Rtn4Q99P72 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC16.13■□□□□ 0.17
Rtn4Q99P72 AC164597.2-201ENSMUST00000226738 603 ntBASIC16.13■□□□□ 0.17
Rtn4Q99P72 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.13■□□□□ 0.17
Rtn4Q99P72 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Gm7049-201ENSMUST00000223520 1712 ntBASIC16.13■□□□□ 0.17
Rtn4Q99P72 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms