Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gtf2ird2Q99NI3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gtf2ird2Q99NI3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gtf2ird2Q99NI3 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gtf2ird2Q99NI3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Gtf2ird2Q99NI3 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gtf2ird2Q99NI3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gtf2ird2Q99NI3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.5□□□□□ -0.41
Gtf2ird2Q99NI3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gtf2ird2Q99NI3 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gtf2ird2Q99NI3 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gtf2ird2Q99NI3 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Gtf2ird2Q99NI3 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Gtf2ird2Q99NI3 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Gm14277-201ENSMUST00000121195 360 ntBASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Gm24990-201ENSMUST00000157406 323 ntBASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gtf2ird2Q99NI3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Gm27627-201ENSMUST00000183644 150 ntBASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 AY036118-201ENSMUST00000200021 923 ntBASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Gm44124-201ENSMUST00000204159 472 ntBASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gtf2ird2Q99NI3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms