Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.57□□□□□ -0.4
Cdk5rap3Q99LM2 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Gm12036-201ENSMUST00000120008 530 ntBASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Gm13570-201ENSMUST00000140763 309 ntBASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Gm17150-201ENSMUST00000165577 381 ntBASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap3Q99LM2 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Gm6266-201ENSMUST00000203844 806 ntBASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cdk5rap3Q99LM2 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms