Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Gm38117-201ENSMUST00000194653 939 ntBASIC12.79□□□□□ -0.36
Clp1Q99LI9 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Gm19009-201ENSMUST00000223072 823 ntBASIC12.79□□□□□ -0.36
Clp1Q99LI9 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clp1Q99LI9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.79□□□□□ -0.36
Clp1Q99LI9 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.79□□□□□ -0.36
Clp1Q99LI9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Clp1Q99LI9 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Clp1Q99LI9 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.78□□□□□ -0.36
Clp1Q99LI9 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clp1Q99LI9 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clp1Q99LI9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Clp1Q99LI9 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Clp1Q99LI9 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Clp1Q99LI9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clp1Q99LI9 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clp1Q99LI9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.77□□□□□ -0.36
Clp1Q99LI9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.77□□□□□ -0.37
Clp1Q99LI9 Gm12628-201ENSMUST00000122193 382 ntBASIC12.77□□□□□ -0.37
Clp1Q99LI9 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Gm5706-201ENSMUST00000181525 993 ntBASIC12.77□□□□□ -0.37
Clp1Q99LI9 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.77□□□□□ -0.37
Clp1Q99LI9 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.77□□□□□ -0.37
Clp1Q99LI9 Gm43084-201ENSMUST00000200696 947 ntBASIC12.77□□□□□ -0.37
Clp1Q99LI9 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.77□□□□□ -0.37
Clp1Q99LI9 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.77□□□□□ -0.37
Clp1Q99LI9 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.77□□□□□ -0.37
Clp1Q99LI9 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.77□□□□□ -0.37
Clp1Q99LI9 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Clp1Q99LI9 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clp1Q99LI9 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clp1Q99LI9 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Clp1Q99LI9 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.76□□□□□ -0.37
Clp1Q99LI9 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clp1Q99LI9 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clp1Q99LI9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Clp1Q99LI9 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clp1Q99LI9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clp1Q99LI9 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clp1Q99LI9 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Clp1Q99LI9 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clp1Q99LI9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Clp1Q99LI9 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Clp1Q99LI9 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.76□□□□□ -0.37
Clp1Q99LI9 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms