Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.92□□□□□ -0.02
RtcbQ99LF4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
RtcbQ99LF4 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RtcbQ99LF4 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RtcbQ99LF4 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RtcbQ99LF4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RtcbQ99LF4 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RtcbQ99LF4 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.91□□□□□ -0.02
RtcbQ99LF4 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Gm25766-201ENSMUST00000104101 131 ntBASIC14.91□□□□□ -0.02
RtcbQ99LF4 Gm11422-201ENSMUST00000118925 1103 ntBASIC14.91□□□□□ -0.02
RtcbQ99LF4 Gm13022-201ENSMUST00000121181 285 ntBASIC14.91□□□□□ -0.02
RtcbQ99LF4 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Gm5706-201ENSMUST00000181525 993 ntBASIC14.91□□□□□ -0.02
RtcbQ99LF4 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC14.91□□□□□ -0.02
RtcbQ99LF4 Gm37981-201ENSMUST00000194280 535 ntBASIC14.91□□□□□ -0.02
RtcbQ99LF4 Gm38151-201ENSMUST00000195085 289 ntBASIC14.91□□□□□ -0.02
RtcbQ99LF4 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Gm3017-201ENSMUST00000203603 1126 ntBASIC14.91□□□□□ -0.02
RtcbQ99LF4 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RtcbQ99LF4 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 n-R5s84-201ENSMUST00000122591 109 ntBASIC14.9□□□□□ -0.02
RtcbQ99LF4 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.9□□□□□ -0.02
RtcbQ99LF4 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Gm26134-201ENSMUST00000178484 110 ntBASIC14.9□□□□□ -0.02
RtcbQ99LF4 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC14.9□□□□□ -0.02
RtcbQ99LF4 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC14.9□□□□□ -0.02
RtcbQ99LF4 CT030653.1-201ENSMUST00000224382 1279 ntBASIC14.9□□□□□ -0.02
RtcbQ99LF4 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC14.9□□□□□ -0.02
RtcbQ99LF4 Gm5451-201ENSMUST00000080545 579 ntBASIC14.9□□□□□ -0.02
RtcbQ99LF4 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RtcbQ99LF4 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RtcbQ99LF4 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RtcbQ99LF4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RtcbQ99LF4 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RtcbQ99LF4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
RtcbQ99LF4 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RtcbQ99LF4 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.89□□□□□ -0.03
RtcbQ99LF4 Gm23272-201ENSMUST00000104053 129 ntBASIC14.89□□□□□ -0.03
RtcbQ99LF4 Gm11783-201ENSMUST00000119549 885 ntBASIC14.89□□□□□ -0.03
RtcbQ99LF4 Gm4034-201ENSMUST00000187674 480 ntBASIC14.89□□□□□ -0.03
RtcbQ99LF4 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RtcbQ99LF4 Gm44315-201ENSMUST00000203041 219 ntBASIC14.89□□□□□ -0.03
RtcbQ99LF4 AC126799.1-201ENSMUST00000221976 246 ntBASIC14.89□□□□□ -0.03
RtcbQ99LF4 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RtcbQ99LF4 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RtcbQ99LF4 Gm5805-201ENSMUST00000072779 456 ntBASIC14.89□□□□□ -0.03
RtcbQ99LF4 Olfr584-201ENSMUST00000098210 964 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms