Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Gm6244-201ENSMUST00000178732 841 ntBASIC12.22□□□□□ -0.45
Cdk9Q99J95 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Gm43433-201ENSMUST00000196573 481 ntBASIC12.22□□□□□ -0.45
Cdk9Q99J95 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdk9Q99J95 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.22□□□□□ -0.45
Cdk9Q99J95 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.22□□□□□ -0.45
Cdk9Q99J95 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk9Q99J95 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.21□□□□□ -0.45
Cdk9Q99J95 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.21□□□□□ -0.45
Cdk9Q99J95 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.21□□□□□ -0.45
Cdk9Q99J95 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.21□□□□□ -0.45
Cdk9Q99J95 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.21□□□□□ -0.45
Cdk9Q99J95 Mir1894-201ENSMUST00000122802 81 ntBASIC12.21□□□□□ -0.45
Cdk9Q99J95 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Gm26185-201ENSMUST00000157692 266 ntBASIC12.21□□□□□ -0.45
Cdk9Q99J95 Gm16296-201ENSMUST00000159905 325 ntBASIC12.21□□□□□ -0.45
Cdk9Q99J95 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Cdk9Q99J95 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cdk9Q99J95 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.21□□□□□ -0.45
Cdk9Q99J95 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk9Q99J95 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdk9Q99J95 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cdk9Q99J95 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Cdk9Q99J95 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdk9Q99J95 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdk9Q99J95 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdk9Q99J95 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.21□□□□□ -0.46
Cdk9Q99J95 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Gm16479-201ENSMUST00000121706 932 ntBASIC12.2□□□□□ -0.46
Cdk9Q99J95 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk9Q99J95 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms