Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.05□□□□□ -0.16
Smc1bQ920F6 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc1bQ920F6 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.04□□□□□ -0.16
Smc1bQ920F6 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc1bQ920F6 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc1bQ920F6 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smc1bQ920F6 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smc1bQ920F6 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.04□□□□□ -0.16
Smc1bQ920F6 Gm9540-201ENSMUST00000188230 478 ntBASIC14.04□□□□□ -0.16
Smc1bQ920F6 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smc1bQ920F6 AY036118-201ENSMUST00000200021 923 ntBASIC14.04□□□□□ -0.16
Smc1bQ920F6 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smc1bQ920F6 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smc1bQ920F6 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.04□□□□□ -0.16
Smc1bQ920F6 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.04□□□□□ -0.16
Smc1bQ920F6 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.04□□□□□ -0.16
Smc1bQ920F6 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc1bQ920F6 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Gm23949-201ENSMUST00000104027 127 ntBASIC14.03□□□□□ -0.16
Smc1bQ920F6 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.03□□□□□ -0.16
Smc1bQ920F6 Gm12029-201ENSMUST00000120073 832 ntBASIC14.03□□□□□ -0.16
Smc1bQ920F6 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.03□□□□□ -0.16
Smc1bQ920F6 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.03□□□□□ -0.16
Smc1bQ920F6 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.03□□□□□ -0.16
Smc1bQ920F6 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.03□□□□□ -0.16
Smc1bQ920F6 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.03□□□□□ -0.16
Smc1bQ920F6 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc1bQ920F6 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Smc1bQ920F6 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.02□□□□□ -0.16
Smc1bQ920F6 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smc1bQ920F6 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smc1bQ920F6 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smc1bQ920F6 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smc1bQ920F6 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.02□□□□□ -0.16
Smc1bQ920F6 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.02□□□□□ -0.16
Smc1bQ920F6 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms