Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rprd1aQ8VDS4 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rprd1aQ8VDS4 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rprd1aQ8VDS4 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rprd1aQ8VDS4 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rprd1aQ8VDS4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rprd1aQ8VDS4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rprd1aQ8VDS4 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Gm15236-201ENSMUST00000117309 379 ntBASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Rprl1-201ENSMUST00000158050 327 ntBASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Gm44124-201ENSMUST00000204159 472 ntBASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rprd1aQ8VDS4 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Gm18711-201ENSMUST00000199341 750 ntBASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms