Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Gm9884-201ENSMUST00000194343 1222 ntBASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Gm38151-201ENSMUST00000195085 289 ntBASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Gm6108-201ENSMUST00000208365 367 ntBASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Gm7082-201ENSMUST00000209880 969 ntBASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Gm4811-201ENSMUST00000220879 1220 ntBASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 AC112945.1-201ENSMUST00000226413 514 ntBASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx54Q8K4L0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Gm15615-201ENSMUST00000118876 198 ntBASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Gm18210-201ENSMUST00000209001 1524 ntBASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ddx54Q8K4L0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx54Q8K4L0 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Ddx54Q8K4L0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx54Q8K4L0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx54Q8K4L0 Gm6831-202ENSMUST00000213025 1673 ntBASIC15.77■□□□□ 0.12
Ddx54Q8K4L0 Gm4900-201ENSMUST00000222046 1628 ntBASIC15.77■□□□□ 0.12
Ddx54Q8K4L0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC15.77■□□□□ 0.12
Ddx54Q8K4L0 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx54Q8K4L0 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC15.77■□□□□ 0.12
Ddx54Q8K4L0 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx54Q8K4L0 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx54Q8K4L0 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC15.77■□□□□ 0.12
Ddx54Q8K4L0 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC15.77■□□□□ 0.12
Ddx54Q8K4L0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx54Q8K4L0 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx54Q8K4L0 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Ddx54Q8K4L0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx54Q8K4L0 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Ddx54Q8K4L0 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx54Q8K4L0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx54Q8K4L0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx54Q8K4L0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx54Q8K4L0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx54Q8K4L0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx54Q8K4L0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx54Q8K4L0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Gm37131-201ENSMUST00000192502 1561 ntBASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Gm5555-201ENSMUST00000120352 1111 ntBASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Gm15620-201ENSMUST00000122949 270 ntBASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Gm18776-201ENSMUST00000188833 654 ntBASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Gm43380-201ENSMUST00000200421 220 ntBASIC15.76■□□□□ 0.11
Ddx54Q8K4L0 Gm43969-201ENSMUST00000204833 535 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms