Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Gm24934-201ENSMUST00000103764 111 ntBASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
Rfwd3Q8CIK8 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Gm12015-201ENSMUST00000117065 843 ntBASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Gm27390-201ENSMUST00000184516 176 ntBASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Gm27320-201ENSMUST00000184892 109 ntBASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Gm44882-201ENSMUST00000205702 802 ntBASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Gm10312-201ENSMUST00000078515 489 ntBASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms