Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm15610-201ENSMUST00000120584 195 ntBASIC13.68□□□□□ -0.22
Syne4Q8CII8 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Gm29410-201ENSMUST00000188383 694 ntBASIC13.68□□□□□ -0.22
Syne4Q8CII8 Gm5100-201ENSMUST00000195631 589 ntBASIC13.68□□□□□ -0.22
Syne4Q8CII8 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Gm9139-201ENSMUST00000218817 700 ntBASIC13.68□□□□□ -0.22
Syne4Q8CII8 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.68□□□□□ -0.22
Syne4Q8CII8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.68□□□□□ -0.22
Syne4Q8CII8 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Syne4Q8CII8 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Syne4Q8CII8 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.67□□□□□ -0.22
Syne4Q8CII8 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.67□□□□□ -0.22
Syne4Q8CII8 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Gm15744-201ENSMUST00000161734 213 ntBASIC13.67□□□□□ -0.22
Syne4Q8CII8 Gm3150-201ENSMUST00000166418 204 ntBASIC13.67□□□□□ -0.22
Syne4Q8CII8 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Syne4Q8CII8 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.67□□□□□ -0.22
Syne4Q8CII8 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.67□□□□□ -0.22
Syne4Q8CII8 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.67□□□□□ -0.22
Syne4Q8CII8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Syne4Q8CII8 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.66□□□□□ -0.22
Syne4Q8CII8 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Gm3619-201ENSMUST00000219947 775 ntBASIC13.66□□□□□ -0.22
Syne4Q8CII8 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Gm23680-201ENSMUST00000083162 164 ntBASIC13.66□□□□□ -0.22
Syne4Q8CII8 Mir483-201ENSMUST00000093631 73 ntBASIC13.66□□□□□ -0.22
Syne4Q8CII8 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Syne4Q8CII8 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Syne4Q8CII8 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms