Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Gm43823-201ENSMUST00000197391 1808 ntBASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Ccdc28bQ8CEG5 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Cog3-203ENSMUST00000227473 4197 ntBASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Gm15920-201ENSMUST00000118998 402 ntBASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Gm27701-201ENSMUST00000184498 110 ntBASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Ccdc28bQ8CEG5 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Gm12859-201ENSMUST00000117834 427 ntBASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Gm8810-201ENSMUST00000172895 754 ntBASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Gm45668-201ENSMUST00000211271 493 ntBASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc28bQ8CEG5 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms