Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sfr1Q8BP27 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Gm13097-201ENSMUST00000210722 397 ntBASIC12.42□□□□□ -0.42
Sfr1Q8BP27 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.42□□□□□ -0.42
Sfr1Q8BP27 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sfr1Q8BP27 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Matn2-203ENSMUST00000226766 3252 ntBASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Gm15276-201ENSMUST00000145953 498 ntBASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.41□□□□□ -0.42
Sfr1Q8BP27 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Gm44882-201ENSMUST00000205702 802 ntBASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.41□□□□□ -0.42
Sfr1Q8BP27 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sfr1Q8BP27 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 137.3 ms