Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Usp1Q8BJQ2 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.93□□□□□ -0.34
Usp1Q8BJQ2 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.93□□□□□ -0.34
Usp1Q8BJQ2 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.93□□□□□ -0.34
Usp1Q8BJQ2 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp1Q8BJQ2 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp1Q8BJQ2 Gm19353-201ENSMUST00000184561 445 ntBASIC12.93□□□□□ -0.34
Usp1Q8BJQ2 Gm4482-201ENSMUST00000200876 742 ntBASIC12.93□□□□□ -0.34
Usp1Q8BJQ2 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp1Q8BJQ2 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.93□□□□□ -0.34
Usp1Q8BJQ2 Gm5455-201ENSMUST00000058710 715 ntBASIC12.93□□□□□ -0.34
Usp1Q8BJQ2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp1Q8BJQ2 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp1Q8BJQ2 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Usp1Q8BJQ2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp1Q8BJQ2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp1Q8BJQ2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp1Q8BJQ2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Usp1Q8BJQ2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp1Q8BJQ2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Gm23596-201ENSMUST00000104304 132 ntBASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Gm25881-201ENSMUST00000157783 103 ntBASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Gm45770-201ENSMUST00000212105 616 ntBASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp1Q8BJQ2 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Gm23251-201ENSMUST00000103773 110 ntBASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Gm12165-201ENSMUST00000117047 342 ntBASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Gm15432-201ENSMUST00000121106 195 ntBASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Gm23085-201ENSMUST00000157849 293 ntBASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Gm26448-201ENSMUST00000082446 203 ntBASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Usp1Q8BJQ2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms