Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Depdc1bQ8BH88 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Gm23270-201ENSMUST00000104055 131 ntBASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Gm25214-201ENSMUST00000104573 129 ntBASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Gm12997-201ENSMUST00000120207 640 ntBASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Gm14999-201ENSMUST00000121039 624 ntBASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Gm15276-201ENSMUST00000145953 498 ntBASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Depdc1bQ8BH88 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Depdc1bQ8BH88 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms