Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.2□□□□□ -0.46
Usp8Q80U87 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Usp8Q80U87 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Usp8Q80U87 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp8Q80U87 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp8Q80U87 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp8Q80U87 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp8Q80U87 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp8Q80U87 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp8Q80U87 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp8Q80U87 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp8Q80U87 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp8Q80U87 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp8Q80U87 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp8Q80U87 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp8Q80U87 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp8Q80U87 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Usp8Q80U87 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Usp8Q80U87 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.19□□□□□ -0.46
Usp8Q80U87 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Usp8Q80U87 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.19□□□□□ -0.46
Usp8Q80U87 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.19□□□□□ -0.46
Usp8Q80U87 Gm11597-201ENSMUST00000121423 964 ntBASIC12.19□□□□□ -0.46
Usp8Q80U87 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Gm7809-201ENSMUST00000153199 742 ntBASIC12.19□□□□□ -0.46
Usp8Q80U87 Gm8738-201ENSMUST00000172606 329 ntBASIC12.19□□□□□ -0.46
Usp8Q80U87 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.19□□□□□ -0.46
Usp8Q80U87 Gm27731-201ENSMUST00000185192 107 ntBASIC12.19□□□□□ -0.46
Usp8Q80U87 Gm45784-201ENSMUST00000188360 142 ntBASIC12.19□□□□□ -0.46
Usp8Q80U87 Gm6007-201ENSMUST00000208170 823 ntBASIC12.19□□□□□ -0.46
Usp8Q80U87 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Gm45925-201ENSMUST00000218882 744 ntBASIC12.19□□□□□ -0.46
Usp8Q80U87 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.19□□□□□ -0.46
Usp8Q80U87 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Usp8Q80U87 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.19□□□□□ -0.46
Usp8Q80U87 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp8Q80U87 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp8Q80U87 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp8Q80U87 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp8Q80U87 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp8Q80U87 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp8Q80U87 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp8Q80U87 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp8Q80U87 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
Usp8Q80U87 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp8Q80U87 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp8Q80U87 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp8Q80U87 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp8Q80U87 Gm14660-201ENSMUST00000119809 575 ntBASIC12.18□□□□□ -0.46
Usp8Q80U87 Gm13315-201ENSMUST00000120376 991 ntBASIC12.18□□□□□ -0.46
Usp8Q80U87 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.18□□□□□ -0.46
Usp8Q80U87 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp8Q80U87 Gm25261-201ENSMUST00000157416 134 ntBASIC12.18□□□□□ -0.46
Usp8Q80U87 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp8Q80U87 Gm27243-201ENSMUST00000183964 521 ntBASIC12.18□□□□□ -0.46
Usp8Q80U87 Gm27390-201ENSMUST00000184516 176 ntBASIC12.18□□□□□ -0.46
Usp8Q80U87 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp8Q80U87 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.18□□□□□ -0.46
Usp8Q80U87 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp8Q80U87 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp8Q80U87 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Usp8Q80U87 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp8Q80U87 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp8Q80U87 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp8Q80U87 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp8Q80U87 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.18□□□□□ -0.46
Usp8Q80U87 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp8Q80U87 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp8Q80U87 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp8Q80U87 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp8Q80U87 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Usp8Q80U87 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp8Q80U87 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp8Q80U87 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp8Q80U87 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Usp8Q80U87 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp8Q80U87 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms