Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Gm1848-201ENSMUST00000120711 789 ntBASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.06□□□□□ -0.16
Nup98Q6PFD9 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Gm14395-201ENSMUST00000120494 563 ntBASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Gm37028-201ENSMUST00000194276 107 ntBASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Gm9139-201ENSMUST00000218817 700 ntBASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Nup98Q6PFD9 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Gm12030-201ENSMUST00000121917 223 ntBASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Gm17825-201ENSMUST00000206836 794 ntBASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Gm45120-201ENSMUST00000208880 408 ntBASIC14.04□□□□□ -0.16
Nup98Q6PFD9 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Gm19009-201ENSMUST00000223072 823 ntBASIC14.04□□□□□ -0.16
Nup98Q6PFD9 AC136376.2-201ENSMUST00000228819 490 ntBASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.04□□□□□ -0.16
Nup98Q6PFD9 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Gm8899-201ENSMUST00000214635 1332 ntBASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Gm12516-201ENSMUST00000120819 385 ntBASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Gm6771-201ENSMUST00000182716 1001 ntBASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms