Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd1Q61466 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd1Q61466 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd1Q61466 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd1Q61466 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd1Q61466 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd1Q61466 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Smarcd1Q61466 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd1Q61466 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd1Q61466 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.62□□□□□ -0.39
Smarcd1Q61466 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd1Q61466 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd1Q61466 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd1Q61466 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd1Q61466 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Smarcd1Q61466 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Smarcd1Q61466 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.62□□□□□ -0.39
Smarcd1Q61466 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Gm23596-201ENSMUST00000104304 132 ntBASIC12.61□□□□□ -0.39
Smarcd1Q61466 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.61□□□□□ -0.39
Smarcd1Q61466 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd1Q61466 AU022133-201ENSMUST00000200601 873 ntBASIC12.61□□□□□ -0.39
Smarcd1Q61466 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.61□□□□□ -0.39
Smarcd1Q61466 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.61□□□□□ -0.39
Smarcd1Q61466 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.61□□□□□ -0.39
Smarcd1Q61466 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.61□□□□□ -0.39
Smarcd1Q61466 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd1Q61466 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd1Q61466 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.6□□□□□ -0.39
Smarcd1Q61466 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd1Q61466 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.6□□□□□ -0.39
Smarcd1Q61466 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.6□□□□□ -0.39
Smarcd1Q61466 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Gm18827-201ENSMUST00000188341 790 ntBASIC12.6□□□□□ -0.39
Smarcd1Q61466 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.6□□□□□ -0.39
Smarcd1Q61466 Gm42599-201ENSMUST00000201308 469 ntBASIC12.6□□□□□ -0.39
Smarcd1Q61466 Gm807-202ENSMUST00000224929 408 ntBASIC12.6□□□□□ -0.39
Smarcd1Q61466 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.6□□□□□ -0.39
Smarcd1Q61466 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Gm5705-201ENSMUST00000066241 711 ntBASIC12.6□□□□□ -0.39
Smarcd1Q61466 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd1Q61466 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd1Q61466 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd1Q61466 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.59□□□□□ -0.39
Smarcd1Q61466 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Smarcd1Q61466 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.59□□□□□ -0.39
Smarcd1Q61466 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms