Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ift88Q61371 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ift88Q61371 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ift88Q61371 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ift88Q61371 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ift88Q61371 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ift88Q61371 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ift88Q61371 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.4□□□□□ -0.26
Ift88Q61371 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Ift88Q61371 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ift88Q61371 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ift88Q61371 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ift88Q61371 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.39□□□□□ -0.27
Ift88Q61371 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Ift88Q61371 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.39□□□□□ -0.27
Ift88Q61371 Gm12058-201ENSMUST00000118614 437 ntBASIC13.39□□□□□ -0.27
Ift88Q61371 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.39□□□□□ -0.27
Ift88Q61371 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.39□□□□□ -0.27
Ift88Q61371 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.39□□□□□ -0.27
Ift88Q61371 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.39□□□□□ -0.27
Ift88Q61371 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Ift88Q61371 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.39□□□□□ -0.27
Ift88Q61371 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.39□□□□□ -0.27
Ift88Q61371 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.39□□□□□ -0.27
Ift88Q61371 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.39□□□□□ -0.27
Ift88Q61371 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ift88Q61371 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Ift88Q61371 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.39□□□□□ -0.27
Ift88Q61371 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ift88Q61371 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ift88Q61371 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ift88Q61371 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Ift88Q61371 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ift88Q61371 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Ift88Q61371 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ift88Q61371 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ift88Q61371 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ift88Q61371 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.38□□□□□ -0.27
Ift88Q61371 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ift88Q61371 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.38□□□□□ -0.27
Ift88Q61371 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ift88Q61371 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.38□□□□□ -0.27
Ift88Q61371 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ift88Q61371 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ift88Q61371 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ift88Q61371 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ift88Q61371 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Ift88Q61371 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ift88Q61371 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ift88Q61371 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ift88Q61371 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ift88Q61371 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ift88Q61371 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ift88Q61371 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ift88Q61371 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ift88Q61371 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ift88Q61371 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ift88Q61371 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ift88Q61371 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ift88Q61371 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.37□□□□□ -0.27
Ift88Q61371 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ift88Q61371 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ift88Q61371 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ift88Q61371 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ift88Q61371 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ift88Q61371 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ift88Q61371 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.37□□□□□ -0.27
Ift88Q61371 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.37□□□□□ -0.27
Ift88Q61371 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.37□□□□□ -0.27
Ift88Q61371 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ift88Q61371 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ift88Q61371 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ift88Q61371 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms