Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.43□□□□□ -0.74
Trav5d-4Q5R1F6 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Gm13392-201ENSMUST00000117708 150 ntBASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Gm7046-201ENSMUST00000221351 977 ntBASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Gm10478-201ENSMUST00000084451 396 ntBASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav5d-4Q5R1F6 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Gm14832-201ENSMUST00000121289 322 ntBASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Olfr284-202ENSMUST00000206647 966 ntBASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms