Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Gm25830-201ENSMUST00000158923 132 ntBASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Gm38117-201ENSMUST00000194653 939 ntBASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Gm38233-201ENSMUST00000194259 807 ntBASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps13aQ5H8C4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Gm22763-201ENSMUST00000158374 107 ntBASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Gm15626-201ENSMUST00000117478 868 ntBASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Gm26174-201ENSMUST00000158415 219 ntBASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Gm42689-201ENSMUST00000202403 404 ntBASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Gm5040-201ENSMUST00000218609 800 ntBASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Gm29543-201ENSMUST00000188138 967 ntBASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Gm43106-201ENSMUST00000199485 637 ntBASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Vps13aQ5H8C4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Mir7035-201ENSMUST00000184713 82 ntBASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Gm7525-201ENSMUST00000219425 454 ntBASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Gm26782-203ENSMUST00000227103 751 ntBASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms