Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Gm42599-201ENSMUST00000201308 469 ntBASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Gm4607-201ENSMUST00000206649 577 ntBASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Gm45433-201ENSMUST00000209386 247 ntBASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nlrc4Q3UP24 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nlrc4Q3UP24 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nlrc4Q3UP24 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.77□□□□□ -0.36
Nlrc4Q3UP24 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Nlrc4Q3UP24 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nlrc4Q3UP24 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nlrc4Q3UP24 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Gm2260-201ENSMUST00000184965 657 ntBASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Map1b-203ENSMUST00000223725 2669 ntBASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nlrc4Q3UP24 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Gm14017-201ENSMUST00000121934 386 ntBASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Gm18893-201ENSMUST00000198416 943 ntBASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.76□□□□□ -0.37
Nlrc4Q3UP24 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms