Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Trim63Q38HM4 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm11543-201ENSMUST00000120758 370 ntBASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm15173-201ENSMUST00000122049 433 ntBASIC9.93□□□□□ -0.82
Trim63Q38HM4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm25948-201ENSMUST00000175334 112 ntBASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm44357-201ENSMUST00000195897 142 ntBASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm19658-201ENSMUST00000196231 138 ntBASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm44367-201ENSMUST00000196836 138 ntBASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm44350-201ENSMUST00000197197 138 ntBASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm44390-201ENSMUST00000197533 144 ntBASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm44313-201ENSMUST00000198018 138 ntBASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm44486-201ENSMUST00000198508 138 ntBASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm44314-201ENSMUST00000199263 138 ntBASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm44394-201ENSMUST00000199558 138 ntBASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm44484-201ENSMUST00000199873 138 ntBASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm44466-201ENSMUST00000200264 138 ntBASIC9.93□□□□□ -0.82
Trim63Q38HM4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm44359-201ENSMUST00000200671 138 ntBASIC9.93□□□□□ -0.82
Trim63Q38HM4 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm6714-201ENSMUST00000218677 2330 ntBASIC9.93□□□□□ -0.82
Trim63Q38HM4 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trim63Q38HM4 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.92□□□□□ -0.82
Trim63Q38HM4 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Gm20796-201ENSMUST00000180355 5838 ntBASIC9.92□□□□□ -0.82
Trim63Q38HM4 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Gm42971-201ENSMUST00000199228 2079 ntBASIC9.92□□□□□ -0.82
Trim63Q38HM4 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Gm18856-201ENSMUST00000178096 1374 ntBASIC9.92□□□□□ -0.82
Trim63Q38HM4 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Aff1-202ENSMUST00000054979 8323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Gm13385-201ENSMUST00000121089 220 ntBASIC9.92□□□□□ -0.82
Trim63Q38HM4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Gm28941-201ENSMUST00000185536 1017 ntBASIC9.92□□□□□ -0.82
Trim63Q38HM4 Gm17807-201ENSMUST00000186869 298 ntBASIC9.92□□□□□ -0.82
Trim63Q38HM4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Gm33142-201ENSMUST00000193913 867 ntBASIC9.92□□□□□ -0.82
Trim63Q38HM4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 AC149588.3-201ENSMUST00000227515 150 ntBASIC9.92□□□□□ -0.82
Trim63Q38HM4 AC154276.1-201ENSMUST00000228874 1299 ntBASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms