Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc1P97496 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc1P97496 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc1P97496 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC15.16■□□□□ 0.02
Smarcc1P97496 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC15.16■□□□□ 0.02
Smarcc1P97496 Gm18367-201ENSMUST00000176139 600 ntBASIC15.16■□□□□ 0.02
Smarcc1P97496 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC15.16■□□□□ 0.02
Smarcc1P97496 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Smarcc1P97496 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC15.16■□□□□ 0.02
Smarcc1P97496 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc1P97496 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc1P97496 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC15.16■□□□□ 0.02
Smarcc1P97496 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.16■□□□□ 0.02
Smarcc1P97496 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc1P97496 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc1P97496 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc1P97496 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Smarcc1P97496 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc1P97496 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc1P97496 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc1P97496 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc1P97496 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc1P97496 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc1P97496 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc1P97496 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Smarcc1P97496 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Smarcc1P97496 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc1P97496 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc1P97496 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc1P97496 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Smarcc1P97496 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Smarcc1P97496 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc1P97496 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc1P97496 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc1P97496 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc1P97496 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc1P97496 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc1P97496 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc1P97496 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Smarcc1P97496 Gm22711-201ENSMUST00000116890 133 ntBASIC15.15■□□□□ 0.02
Smarcc1P97496 Gm13600-201ENSMUST00000117949 744 ntBASIC15.15■□□□□ 0.02
Smarcc1P97496 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC15.15■□□□□ 0.02
Smarcc1P97496 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.15■□□□□ 0.02
Smarcc1P97496 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc1P97496 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc1P97496 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC15.15■□□□□ 0.02
Smarcc1P97496 Gm37458-201ENSMUST00000194055 410 ntBASIC15.15■□□□□ 0.02
Smarcc1P97496 Gm5298-201ENSMUST00000201122 892 ntBASIC15.15■□□□□ 0.02
Smarcc1P97496 Gm44158-201ENSMUST00000203881 505 ntBASIC15.15■□□□□ 0.02
Smarcc1P97496 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC15.15■□□□□ 0.02
Smarcc1P97496 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Smarcc1P97496 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC15.15■□□□□ 0.02
Smarcc1P97496 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc1P97496 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc1P97496 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Smarcc1P97496 AC126257.1-201ENSMUST00000213195 1536 ntBASIC15.15■□□□□ 0.02
Smarcc1P97496 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc1P97496 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.15■□□□□ 0.02
Smarcc1P97496 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc1P97496 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Smarcc1P97496 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC15.15■□□□□ 0.02
Smarcc1P97496 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc1P97496 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc1P97496 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Smarcc1P97496 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC15.15■□□□□ 0.02
Smarcc1P97496 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc1P97496 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc1P97496 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc1P97496 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc1P97496 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc1P97496 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc1P97496 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc1P97496 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc1P97496 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc1P97496 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc1P97496 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc1P97496 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc1P97496 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Smarcc1P97496 Gm11801-201ENSMUST00000117807 746 ntBASIC15.14■□□□□ 0.01
Smarcc1P97496 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC15.14■□□□□ 0.01
Smarcc1P97496 Gm24844-201ENSMUST00000158679 127 ntBASIC15.14■□□□□ 0.01
Smarcc1P97496 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc1P97496 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC15.14■□□□□ 0.01
Smarcc1P97496 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc1P97496 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC15.14■□□□□ 0.01
Smarcc1P97496 Gm8531-201ENSMUST00000188319 893 ntBASIC15.14■□□□□ 0.01
Smarcc1P97496 Gm45594-201ENSMUST00000211717 241 ntBASIC15.14■□□□□ 0.01
Smarcc1P97496 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC15.14■□□□□ 0.01
Smarcc1P97496 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Smarcc1P97496 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc1P97496 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.14■□□□□ 0.01
Smarcc1P97496 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc1P97496 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc1P97496 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.14■□□□□ 0.01
Smarcc1P97496 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc1P97496 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc1P97496 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc1P97496 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc1P97496 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.13■□□□□ 0.01
Smarcc1P97496 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms