Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.82□□□□□ -0.68
H3f3aP84244 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.82□□□□□ -0.68
H3f3aP84244 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
H3f3aP84244 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
H3f3aP84244 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
H3f3aP84244 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
H3f3aP84244 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
H3f3aP84244 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
H3f3aP84244 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.81□□□□□ -0.68
H3f3aP84244 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.81□□□□□ -0.68
H3f3aP84244 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.81□□□□□ -0.68
H3f3aP84244 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.81□□□□□ -0.68
H3f3aP84244 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.81□□□□□ -0.68
H3f3aP84244 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.81□□□□□ -0.68
H3f3aP84244 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
H3f3aP84244 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.81□□□□□ -0.68
H3f3aP84244 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.81□□□□□ -0.68
H3f3aP84244 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.81□□□□□ -0.68
H3f3aP84244 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.81□□□□□ -0.68
H3f3aP84244 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
H3f3aP84244 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.81□□□□□ -0.68
H3f3aP84244 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
H3f3aP84244 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H3f3aP84244 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3aP84244 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
H3f3aP84244 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3aP84244 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3aP84244 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3aP84244 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.8□□□□□ -0.68
H3f3aP84244 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.8□□□□□ -0.68
H3f3aP84244 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3aP84244 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.8□□□□□ -0.68
H3f3aP84244 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3aP84244 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3aP84244 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3aP84244 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3aP84244 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
H3f3aP84244 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3aP84244 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3aP84244 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.8□□□□□ -0.68
H3f3aP84244 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.8□□□□□ -0.68
H3f3aP84244 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
H3f3aP84244 Gm26083-201ENSMUST00000157904 193 ntBASIC10.8□□□□□ -0.68
H3f3aP84244 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.8□□□□□ -0.68
H3f3aP84244 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.8□□□□□ -0.68
H3f3aP84244 Gm44651-201ENSMUST00000207343 372 ntBASIC10.8□□□□□ -0.68
H3f3aP84244 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.8□□□□□ -0.68
H3f3aP84244 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3aP84244 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3aP84244 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H3f3aP84244 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms