Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SgcbP82349 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SgcbP82349 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.86□□□□□ -0.67
SgcbP82349 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.86□□□□□ -0.67
SgcbP82349 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.86□□□□□ -0.67
SgcbP82349 Gm8885-201ENSMUST00000189382 598 ntBASIC10.86□□□□□ -0.67
SgcbP82349 Gm37293-201ENSMUST00000191658 295 ntBASIC10.86□□□□□ -0.67
SgcbP82349 Gm9723-201ENSMUST00000192100 457 ntBASIC10.86□□□□□ -0.67
SgcbP82349 Gm32999-201ENSMUST00000192693 562 ntBASIC10.86□□□□□ -0.67
SgcbP82349 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.86□□□□□ -0.67
SgcbP82349 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
SgcbP82349 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.86□□□□□ -0.67
SgcbP82349 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
SgcbP82349 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SgcbP82349 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.86□□□□□ -0.67
SgcbP82349 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
SgcbP82349 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SgcbP82349 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcbP82349 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.85□□□□□ -0.67
SgcbP82349 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
SgcbP82349 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
SgcbP82349 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.85□□□□□ -0.67
SgcbP82349 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.85□□□□□ -0.67
SgcbP82349 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.85□□□□□ -0.67
SgcbP82349 Gm11989-201ENSMUST00000117240 672 ntBASIC10.85□□□□□ -0.67
SgcbP82349 Gm14542-201ENSMUST00000118460 1248 ntBASIC10.85□□□□□ -0.67
SgcbP82349 Gm11362-201ENSMUST00000118838 850 ntBASIC10.85□□□□□ -0.67
SgcbP82349 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.85□□□□□ -0.67
SgcbP82349 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Gm43037-201ENSMUST00000196808 250 ntBASIC10.85□□□□□ -0.67
SgcbP82349 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Gm19187-201ENSMUST00000206781 892 ntBASIC10.85□□□□□ -0.67
SgcbP82349 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Gm45598-202ENSMUST00000210719 986 ntBASIC10.85□□□□□ -0.67
SgcbP82349 Gm45878-201ENSMUST00000211839 241 ntBASIC10.85□□□□□ -0.67
SgcbP82349 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.85□□□□□ -0.67
SgcbP82349 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.85□□□□□ -0.67
SgcbP82349 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
SgcbP82349 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.85□□□□□ -0.67
SgcbP82349 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcbP82349 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
SgcbP82349 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.84□□□□□ -0.67
SgcbP82349 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms