Protein–RNA interactions for Protein: P70217

Hoxd13, Homeobox protein Hox-D13, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd13P70217 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Hoxd13P70217 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hoxd13P70217 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Hoxd13P70217 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.53□□□□□ -0.4
Hoxd13P70217 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Gm8194-201ENSMUST00000159783 859 ntBASIC12.53□□□□□ -0.4
Hoxd13P70217 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.53□□□□□ -0.4
Hoxd13P70217 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Snora73b-201ENSMUST00000083419 205 ntBASIC12.53□□□□□ -0.4
Hoxd13P70217 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hoxd13P70217 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.53□□□□□ -0.4
Hoxd13P70217 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Hoxd13P70217 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxd13P70217 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hoxd13P70217 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxd13P70217 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.52□□□□□ -0.4
Hoxd13P70217 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hoxd13P70217 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxd13P70217 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.52□□□□□ -0.4
Hoxd13P70217 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxd13P70217 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxd13P70217 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.4
Hoxd13P70217 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxd13P70217 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.52□□□□□ -0.4
Hoxd13P70217 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hoxd13P70217 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxd13P70217 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxd13P70217 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxd13P70217 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxd13P70217 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxd13P70217 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Hoxd13P70217 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd13P70217 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.52□□□□□ -0.41
Hoxd13P70217 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd13P70217 Gm8815-201ENSMUST00000173809 620 ntBASIC12.52□□□□□ -0.41
Hoxd13P70217 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.52□□□□□ -0.41
Hoxd13P70217 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd13P70217 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.52□□□□□ -0.41
Hoxd13P70217 Gm4034-201ENSMUST00000187674 480 ntBASIC12.52□□□□□ -0.41
Hoxd13P70217 Gm7600-201ENSMUST00000209657 785 ntBASIC12.52□□□□□ -0.41
Hoxd13P70217 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.52□□□□□ -0.41
Hoxd13P70217 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd13P70217 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd13P70217 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hoxd13P70217 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd13P70217 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Hoxd13P70217 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd13P70217 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd13P70217 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hoxd13P70217 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd13P70217 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd13P70217 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd13P70217 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd13P70217 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hoxd13P70217 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd13P70217 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd13P70217 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd13P70217 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hoxd13P70217 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd13P70217 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.52□□□□□ -0.41
Hoxd13P70217 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd13P70217 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hoxd13P70217 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd13P70217 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.51□□□□□ -0.41
Hoxd13P70217 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.51□□□□□ -0.41
Hoxd13P70217 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd13P70217 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd13P70217 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.51□□□□□ -0.41
Hoxd13P70217 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd13P70217 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Hoxd13P70217 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd13P70217 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd13P70217 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd13P70217 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.51□□□□□ -0.41
Hoxd13P70217 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms