Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SmoP56726 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SmoP56726 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.18□□□□□ -0.46
SmoP56726 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.18□□□□□ -0.46
SmoP56726 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.18□□□□□ -0.46
SmoP56726 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.18□□□□□ -0.46
SmoP56726 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.18□□□□□ -0.46
SmoP56726 Gm26448-201ENSMUST00000082446 203 ntBASIC12.18□□□□□ -0.46
SmoP56726 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.18□□□□□ -0.46
SmoP56726 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.18□□□□□ -0.46
SmoP56726 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SmoP56726 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.18□□□□□ -0.46
SmoP56726 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SmoP56726 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SmoP56726 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SmoP56726 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SmoP56726 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SmoP56726 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SmoP56726 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SmoP56726 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SmoP56726 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.18□□□□□ -0.46
SmoP56726 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SmoP56726 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SmoP56726 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.17□□□□□ -0.46
SmoP56726 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.17□□□□□ -0.46
SmoP56726 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SmoP56726 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SmoP56726 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.17□□□□□ -0.46
SmoP56726 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SmoP56726 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SmoP56726 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SmoP56726 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SmoP56726 Gm23596-201ENSMUST00000104304 132 ntBASIC12.17□□□□□ -0.46
SmoP56726 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
SmoP56726 Gm15515-201ENSMUST00000117827 822 ntBASIC12.17□□□□□ -0.46
SmoP56726 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.17□□□□□ -0.46
SmoP56726 Gm18734-201ENSMUST00000172937 808 ntBASIC12.17□□□□□ -0.46
SmoP56726 Gm17931-201ENSMUST00000208132 634 ntBASIC12.17□□□□□ -0.46
SmoP56726 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SmoP56726 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SmoP56726 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SmoP56726 Gm5705-201ENSMUST00000066241 711 ntBASIC12.17□□□□□ -0.46
SmoP56726 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
SmoP56726 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SmoP56726 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SmoP56726 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SmoP56726 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.17□□□□□ -0.46
SmoP56726 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.17□□□□□ -0.46
SmoP56726 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SmoP56726 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.17□□□□□ -0.46
SmoP56726 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SmoP56726 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SmoP56726 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
SmoP56726 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SmoP56726 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SmoP56726 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SmoP56726 Map1b-203ENSMUST00000223725 2669 ntBASIC12.16□□□□□ -0.46
SmoP56726 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.16□□□□□ -0.46
SmoP56726 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.16□□□□□ -0.46
SmoP56726 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SmoP56726 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.16□□□□□ -0.46
SmoP56726 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SmoP56726 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SmoP56726 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.16□□□□□ -0.46
SmoP56726 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.16□□□□□ -0.46
SmoP56726 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.16□□□□□ -0.46
SmoP56726 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.16□□□□□ -0.46
SmoP56726 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.16□□□□□ -0.46
SmoP56726 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.16□□□□□ -0.46
SmoP56726 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
SmoP56726 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.16□□□□□ -0.46
SmoP56726 Gm3332-201ENSMUST00000189337 928 ntBASIC12.16□□□□□ -0.46
SmoP56726 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 Gm7848-201ENSMUST00000210739 718 ntBASIC12.16□□□□□ -0.46
SmoP56726 Gm807-202ENSMUST00000224929 408 ntBASIC12.16□□□□□ -0.46
SmoP56726 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.16□□□□□ -0.46
SmoP56726 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
SmoP56726 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SmoP56726 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SmoP56726 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms