Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC7.78□□□□□ -1.16
Xcl1P47993 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Arid1b-203ENSMUST00000115799 9888 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Xcl1P47993 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Nup188-201ENSMUST00000064447 5710 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 CT868720.1-201ENSMUST00000223069 2544 ntBASIC7.78□□□□□ -1.16
Xcl1P47993 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Gm6433-201ENSMUST00000118634 875 ntBASIC7.78□□□□□ -1.16
Xcl1P47993 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC7.78□□□□□ -1.16
Xcl1P47993 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Xcl1P47993 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC7.78□□□□□ -1.16
Xcl1P47993 Gm7230-201ENSMUST00000173026 815 ntBASIC7.78□□□□□ -1.16
Xcl1P47993 AC153872.1-201ENSMUST00000199539 128 ntBASIC7.78□□□□□ -1.16
Xcl1P47993 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC7.78□□□□□ -1.16
Xcl1P47993 CT030684.1-201ENSMUST00000227292 914 ntBASIC7.78□□□□□ -1.16
Xcl1P47993 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC7.78□□□□□ -1.16
Xcl1P47993 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC7.78□□□□□ -1.16
Xcl1P47993 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Xcl1P47993 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Gm18856-201ENSMUST00000178096 1374 ntBASIC7.78□□□□□ -1.16
Xcl1P47993 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC7.78□□□□□ -1.16
Xcl1P47993 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Xcl1P47993 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC7.78□□□□□ -1.16
Xcl1P47993 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Xcl1P47993 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Gm38194-201ENSMUST00000194529 2211 ntBASIC7.78□□□□□ -1.16
Xcl1P47993 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Gm9361-201ENSMUST00000198695 1507 ntBASIC7.78□□□□□ -1.16
Xcl1P47993 Gm29245-201ENSMUST00000187332 1416 ntBASIC7.78□□□□□ -1.16
Xcl1P47993 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Xcl1P47993 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Xcl1P47993 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Xcl1P47993 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Xcl1P47993 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC7.77□□□□□ -1.16
Xcl1P47993 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Xcl1P47993 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Xcl1P47993 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.16
Xcl1P47993 Gm5403-201ENSMUST00000117105 2795 ntBASIC7.77□□□□□ -1.16
Xcl1P47993 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
Xcl1P47993 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Xcl1P47993 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Xcl1P47993 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC7.77□□□□□ -1.17
Xcl1P47993 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Xcl1P47993 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Xcl1P47993 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
Xcl1P47993 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Xcl1P47993 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Xcl1P47993 AC123738.2-201ENSMUST00000223791 1899 ntBASIC7.77□□□□□ -1.17
Xcl1P47993 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Xcl1P47993 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC7.77□□□□□ -1.17
Xcl1P47993 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Xcl1P47993 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Xcl1P47993 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Xcl1P47993 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Xcl1P47993 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Xcl1P47993 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Xcl1P47993 AC167022.1-201ENSMUST00000218647 1458 ntBASIC7.77□□□□□ -1.17
Xcl1P47993 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Xcl1P47993 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Xcl1P47993 Gm7964-201ENSMUST00000051522 1378 ntBASIC7.77□□□□□ -1.17
Xcl1P47993 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Xcl1P47993 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms