Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gli1P47806 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gli1P47806 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.87□□□□□ -0.51
Gli1P47806 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gli1P47806 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.87□□□□□ -0.51
Gli1P47806 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Gli1P47806 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Gli1P47806 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gli1P47806 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Gli1P47806 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gli1P47806 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gli1P47806 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Gli1P47806 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
Gli1P47806 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gli1P47806 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Gli1P47806 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Gli1P47806 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.86□□□□□ -0.51
Gli1P47806 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.86□□□□□ -0.51
Gli1P47806 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Gli1P47806 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Gli1P47806 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Gli1P47806 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.86□□□□□ -0.51
Gli1P47806 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Gm24231-201ENSMUST00000104315 133 ntBASIC11.86□□□□□ -0.51
Gli1P47806 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.86□□□□□ -0.51
Gli1P47806 Gm15703-201ENSMUST00000120250 880 ntBASIC11.86□□□□□ -0.51
Gli1P47806 Gm16479-201ENSMUST00000121706 932 ntBASIC11.86□□□□□ -0.51
Gli1P47806 Gm7809-201ENSMUST00000153199 742 ntBASIC11.86□□□□□ -0.51
Gli1P47806 Gm16296-201ENSMUST00000159905 325 ntBASIC11.86□□□□□ -0.51
Gli1P47806 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.86□□□□□ -0.51
Gli1P47806 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.86□□□□□ -0.51
Gli1P47806 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.86□□□□□ -0.51
Gli1P47806 Gm42599-201ENSMUST00000201308 469 ntBASIC11.86□□□□□ -0.51
Gli1P47806 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Gli1P47806 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Gli1P47806 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gli1P47806 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.86□□□□□ -0.51
Gli1P47806 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gli1P47806 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.85□□□□□ -0.51
Gli1P47806 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Gli1P47806 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Gli1P47806 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gli1P47806 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gli1P47806 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gli1P47806 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gli1P47806 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Gli1P47806 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Gli1P47806 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Gli1P47806 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gli1P47806 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Gli1P47806 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gli1P47806 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.85□□□□□ -0.51
Gli1P47806 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gli1P47806 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gli1P47806 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Gli1P47806 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.85□□□□□ -0.51
Gli1P47806 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Gli1P47806 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gli1P47806 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.85□□□□□ -0.51
Gli1P47806 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Gli1P47806 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gli1P47806 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.85□□□□□ -0.51
Gli1P47806 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gli1P47806 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gli1P47806 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gli1P47806 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.85□□□□□ -0.51
Gli1P47806 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.85□□□□□ -0.51
Gli1P47806 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.85□□□□□ -0.51
Gli1P47806 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.85□□□□□ -0.51
Gli1P47806 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gli1P47806 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
Gli1P47806 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gli1P47806 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Gli1P47806 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms