Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps4bP46467 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps4bP46467 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps4bP46467 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.32□□□□□ -0.44
Vps4bP46467 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps4bP46467 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps4bP46467 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vps4bP46467 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps4bP46467 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.31□□□□□ -0.44
Vps4bP46467 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Vps4bP46467 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Vps4bP46467 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.31□□□□□ -0.44
Vps4bP46467 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Gm12036-201ENSMUST00000120008 530 ntBASIC12.31□□□□□ -0.44
Vps4bP46467 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Vps4bP46467 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.31□□□□□ -0.44
Vps4bP46467 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.31□□□□□ -0.44
Vps4bP46467 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Vps4bP46467 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Gm38241-201ENSMUST00000192641 898 ntBASIC12.31□□□□□ -0.44
Vps4bP46467 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.31□□□□□ -0.44
Vps4bP46467 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.31□□□□□ -0.44
Vps4bP46467 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.31□□□□□ -0.44
Vps4bP46467 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Vps4bP46467 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Vps4bP46467 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Vps4bP46467 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Vps4bP46467 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps4bP46467 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.3□□□□□ -0.44
Vps4bP46467 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vps4bP46467 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vps4bP46467 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Vps4bP46467 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.3□□□□□ -0.44
Vps4bP46467 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.3□□□□□ -0.44
Vps4bP46467 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.3□□□□□ -0.44
Vps4bP46467 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.3□□□□□ -0.44
Vps4bP46467 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.3□□□□□ -0.44
Vps4bP46467 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.3□□□□□ -0.44
Vps4bP46467 Gm26461-201ENSMUST00000175064 290 ntBASIC12.3□□□□□ -0.44
Vps4bP46467 Gm4857-201ENSMUST00000192718 785 ntBASIC12.3□□□□□ -0.44
Vps4bP46467 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.3□□□□□ -0.44
Vps4bP46467 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.3□□□□□ -0.44
Vps4bP46467 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.3□□□□□ -0.44
Vps4bP46467 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.3□□□□□ -0.44
Vps4bP46467 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vps4bP46467 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps4bP46467 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.29□□□□□ -0.44
Vps4bP46467 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Vps4bP46467 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms