Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf1aP25118 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf1aP25118 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Tnfrsf1aP25118 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf1aP25118 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf1aP25118 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf1aP25118 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf1aP25118 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf1aP25118 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.16□□□□□ -0.78
Tnfrsf1aP25118 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf1aP25118 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf1aP25118 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.16□□□□□ -0.78
Tnfrsf1aP25118 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf1aP25118 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf1aP25118 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf1aP25118 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf1aP25118 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Gm27514-201ENSMUST00000183692 110 ntBASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf1aP25118 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Tnfrsf1aP25118 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.15□□□□□ -0.79
Tnfrsf1aP25118 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Tnfrsf1aP25118 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Tnfrsf1aP25118 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Tnfrsf1aP25118 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Tnfrsf1aP25118 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Tnfrsf1aP25118 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Tnfrsf1aP25118 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Tnfrsf1aP25118 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Tnfrsf1aP25118 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Tnfrsf1aP25118 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Tnfrsf1aP25118 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.15□□□□□ -0.79
Tnfrsf1aP25118 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 Gm24934-201ENSMUST00000103764 111 ntBASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 Gm23912-201ENSMUST00000104687 87 ntBASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 Gm2546-201ENSMUST00000182630 991 ntBASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Tnfrsf1aP25118 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms