Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ccl3P10855 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC10.69□□□□□ -0.7
Ccl3P10855 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ccl3P10855 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Ccl3P10855 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Ccl3P10855 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Ccl3P10855 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.69□□□□□ -0.7
Ccl3P10855 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.69□□□□□ -0.7
Ccl3P10855 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ccl3P10855 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.68□□□□□ -0.7
Ccl3P10855 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ccl3P10855 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC10.68□□□□□ -0.7
Ccl3P10855 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Ccl3P10855 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.68□□□□□ -0.7
Ccl3P10855 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.68□□□□□ -0.7
Ccl3P10855 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC10.68□□□□□ -0.7
Ccl3P10855 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC10.68□□□□□ -0.7
Ccl3P10855 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.68□□□□□ -0.7
Ccl3P10855 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.68□□□□□ -0.7
Ccl3P10855 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.68□□□□□ -0.7
Ccl3P10855 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC10.68□□□□□ -0.7
Ccl3P10855 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ccl3P10855 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ccl3P10855 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Gm37028-201ENSMUST00000194276 107 ntBASIC10.68□□□□□ -0.7
Ccl3P10855 Gm42518-201ENSMUST00000196277 938 ntBASIC10.68□□□□□ -0.7
Ccl3P10855 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC10.68□□□□□ -0.7
Ccl3P10855 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.68□□□□□ -0.7
Ccl3P10855 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.68□□□□□ -0.7
Ccl3P10855 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ccl3P10855 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ccl3P10855 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.68□□□□□ -0.7
Ccl3P10855 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.68□□□□□ -0.7
Ccl3P10855 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Ccl3P10855 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ccl3P10855 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ccl3P10855 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl3P10855 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Ccl3P10855 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
Ccl3P10855 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.67□□□□□ -0.7
Ccl3P10855 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Ccl3P10855 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.67□□□□□ -0.7
Ccl3P10855 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.67□□□□□ -0.7
Ccl3P10855 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl3P10855 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms