Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NclP09405 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NclP09405 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NclP09405 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC17.98■□□□□ 0.47
NclP09405 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NclP09405 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NclP09405 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NclP09405 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NclP09405 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
NclP09405 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
NclP09405 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NclP09405 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NclP09405 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
NclP09405 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NclP09405 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NclP09405 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC17.97■□□□□ 0.47
NclP09405 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NclP09405 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NclP09405 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NclP09405 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NclP09405 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NclP09405 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NclP09405 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NclP09405 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NclP09405 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NclP09405 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NclP09405 Gm12857-201ENSMUST00000117678 592 ntBASIC17.97■□□□□ 0.47
NclP09405 Gm6506-201ENSMUST00000119775 1136 ntBASIC17.97■□□□□ 0.47
NclP09405 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC17.97■□□□□ 0.47
NclP09405 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC17.97■□□□□ 0.47
NclP09405 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
NclP09405 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NclP09405 Gm22334-201ENSMUST00000158070 133 ntBASIC17.97■□□□□ 0.47
NclP09405 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC17.97■□□□□ 0.47
NclP09405 Gm4034-201ENSMUST00000187674 480 ntBASIC17.97■□□□□ 0.47
NclP09405 Gm9555-201ENSMUST00000200908 583 ntBASIC17.97■□□□□ 0.47
NclP09405 Gm8956-201ENSMUST00000203939 825 ntBASIC17.97■□□□□ 0.47
NclP09405 Gm18393-201ENSMUST00000208349 1131 ntBASIC17.97■□□□□ 0.47
NclP09405 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC17.97■□□□□ 0.47
NclP09405 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NclP09405 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NclP09405 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NclP09405 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NclP09405 Gm37660-201ENSMUST00000192754 1732 ntBASIC17.97■□□□□ 0.47
NclP09405 Gm44292-201ENSMUST00000205194 2364 ntBASIC17.97■□□□□ 0.47
NclP09405 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NclP09405 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NclP09405 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NclP09405 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NclP09405 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NclP09405 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NclP09405 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
NclP09405 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NclP09405 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NclP09405 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NclP09405 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NclP09405 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NclP09405 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NclP09405 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC17.96■□□□□ 0.47
NclP09405 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NclP09405 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NclP09405 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NclP09405 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC17.96■□□□□ 0.47
NclP09405 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NclP09405 Gm13045-201ENSMUST00000119019 712 ntBASIC17.96■□□□□ 0.47
NclP09405 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NclP09405 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC17.96■□□□□ 0.47
NclP09405 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC17.96■□□□□ 0.47
NclP09405 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC17.96■□□□□ 0.47
NclP09405 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC17.96■□□□□ 0.47
NclP09405 Gm5523-201ENSMUST00000180415 997 ntBASIC17.96■□□□□ 0.47
NclP09405 Gm9211-201ENSMUST00000182882 975 ntBASIC17.96■□□□□ 0.47
NclP09405 Gm19353-201ENSMUST00000184561 445 ntBASIC17.96■□□□□ 0.47
NclP09405 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NclP09405 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC17.96■□□□□ 0.47
NclP09405 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NclP09405 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NclP09405 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NclP09405 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NclP09405 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NclP09405 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NclP09405 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NclP09405 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC17.96■□□□□ 0.46
NclP09405 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NclP09405 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NclP09405 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NclP09405 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NclP09405 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NclP09405 Gm44758-201ENSMUST00000206096 2068 ntBASIC17.95■□□□□ 0.46
NclP09405 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
NclP09405 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NclP09405 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
NclP09405 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NclP09405 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NclP09405 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
NclP09405 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
NclP09405 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NclP09405 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC17.95■□□□□ 0.46
NclP09405 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NclP09405 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms