Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm22442-201ENSMUST00000157256 144 ntBASIC12.24□□□□□ -0.45
Hoxb3P09026 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hoxb3P09026 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Hoxb3P09026 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxb3P09026 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxb3P09026 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.24□□□□□ -0.45
Hoxb3P09026 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC12.24□□□□□ -0.45
Hoxb3P09026 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hoxb3P09026 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hoxb3P09026 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hoxb3P09026 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxb3P09026 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.24□□□□□ -0.45
Hoxb3P09026 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.24□□□□□ -0.45
Hoxb3P09026 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxb3P09026 Gm37666-201ENSMUST00000194110 866 ntBASIC12.24□□□□□ -0.45
Hoxb3P09026 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC12.24□□□□□ -0.45
Hoxb3P09026 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxb3P09026 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Hoxb3P09026 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxb3P09026 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC12.24□□□□□ -0.45
Hoxb3P09026 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.24□□□□□ -0.45
Hoxb3P09026 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxb3P09026 AC154595.1-201ENSMUST00000225533 1059 ntBASIC12.24□□□□□ -0.45
Hoxb3P09026 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxb3P09026 Elobl-201ENSMUST00000061938 819 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxb3P09026 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Hoxb3P09026 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.24□□□□□ -0.45
Hoxb3P09026 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxb3P09026 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxb3P09026 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.24□□□□□ -0.45
Hoxb3P09026 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Hoxb3P09026 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxb3P09026 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Hoxb3P09026 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxb3P09026 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxb3P09026 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxb3P09026 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxb3P09026 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxb3P09026 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxb3P09026 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.24□□□□□ -0.45
Hoxb3P09026 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxb3P09026 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Hoxb3P09026 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.23□□□□□ -0.45
Hoxb3P09026 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.23□□□□□ -0.45
Hoxb3P09026 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Hoxb3P09026 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Hoxb3P09026 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Hoxb3P09026 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.23□□□□□ -0.45
Hoxb3P09026 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Hoxb3P09026 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.23□□□□□ -0.45
Hoxb3P09026 Gm15515-201ENSMUST00000117827 822 ntBASIC12.23□□□□□ -0.45
Hoxb3P09026 Gm13019-201ENSMUST00000120000 276 ntBASIC12.23□□□□□ -0.45
Hoxb3P09026 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC12.23□□□□□ -0.45
Hoxb3P09026 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.23□□□□□ -0.45
Hoxb3P09026 Gm23675-201ENSMUST00000157311 125 ntBASIC12.23□□□□□ -0.45
Hoxb3P09026 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC12.23□□□□□ -0.45
Hoxb3P09026 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Hoxb3P09026 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
Hoxb3P09026 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Gm37845-201ENSMUST00000194977 355 ntBASIC12.23□□□□□ -0.45
Hoxb3P09026 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC12.23□□□□□ -0.45
Hoxb3P09026 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.23□□□□□ -0.45
Hoxb3P09026 Gm2517-201ENSMUST00000215651 348 ntBASIC12.23□□□□□ -0.45
Hoxb3P09026 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 AC117797.1-201ENSMUST00000223977 695 ntBASIC12.23□□□□□ -0.45
Hoxb3P09026 Gm1821-202ENSMUST00000227415 750 ntBASIC12.23□□□□□ -0.45
Hoxb3P09026 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Hoxb3P09026 Manf-201ENSMUST00000069036 960 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Hoxb3P09026 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.23□□□□□ -0.45
Hoxb3P09026 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxb3P09026 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms