Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PrnpP04925 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrnpP04925 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrnpP04925 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrnpP04925 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.54□□□□□ -0.4
PrnpP04925 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.54□□□□□ -0.4
PrnpP04925 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.54□□□□□ -0.4
PrnpP04925 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.54□□□□□ -0.4
PrnpP04925 Gm1848-201ENSMUST00000120711 789 ntBASIC12.54□□□□□ -0.4
PrnpP04925 Mir1901-201ENSMUST00000122616 78 ntBASIC12.54□□□□□ -0.4
PrnpP04925 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.54□□□□□ -0.4
PrnpP04925 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.54□□□□□ -0.4
PrnpP04925 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.54□□□□□ -0.4
PrnpP04925 Gm23153-201ENSMUST00000175323 313 ntBASIC12.54□□□□□ -0.4
PrnpP04925 Gm21092-201ENSMUST00000178995 955 ntBASIC12.54□□□□□ -0.4
PrnpP04925 Gm4654-201ENSMUST00000183305 982 ntBASIC12.54□□□□□ -0.4
PrnpP04925 Mir6958-201ENSMUST00000184207 73 ntBASIC12.54□□□□□ -0.4
PrnpP04925 Gm29155-201ENSMUST00000185910 269 ntBASIC12.54□□□□□ -0.4
PrnpP04925 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.54□□□□□ -0.4
PrnpP04925 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.54□□□□□ -0.4
PrnpP04925 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PrnpP04925 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.54□□□□□ -0.4
PrnpP04925 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrnpP04925 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
PrnpP04925 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrnpP04925 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrnpP04925 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrnpP04925 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.54□□□□□ -0.4
PrnpP04925 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrnpP04925 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrnpP04925 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrnpP04925 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.54□□□□□ -0.4
PrnpP04925 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PrnpP04925 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.54□□□□□ -0.4
PrnpP04925 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrnpP04925 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrnpP04925 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
PrnpP04925 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
PrnpP04925 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.53□□□□□ -0.4
PrnpP04925 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.53□□□□□ -0.4
PrnpP04925 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
PrnpP04925 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
PrnpP04925 Gm16071-201ENSMUST00000119589 793 ntBASIC12.53□□□□□ -0.4
PrnpP04925 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
PrnpP04925 Gm25072-201ENSMUST00000175233 235 ntBASIC12.53□□□□□ -0.4
PrnpP04925 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.53□□□□□ -0.4
PrnpP04925 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Gm17826-201ENSMUST00000189720 798 ntBASIC12.53□□□□□ -0.4
PrnpP04925 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.53□□□□□ -0.4
PrnpP04925 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.53□□□□□ -0.4
PrnpP04925 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.53□□□□□ -0.4
PrnpP04925 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
PrnpP04925 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
PrnpP04925 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.53□□□□□ -0.4
PrnpP04925 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.53□□□□□ -0.4
PrnpP04925 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.53□□□□□ -0.4
PrnpP04925 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
PrnpP04925 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
PrnpP04925 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.53□□□□□ -0.4
PrnpP04925 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PrnpP04925 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PrnpP04925 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PrnpP04925 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PrnpP04925 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.52□□□□□ -0.4
PrnpP04925 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
PrnpP04925 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.52□□□□□ -0.4
PrnpP04925 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
PrnpP04925 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PrnpP04925 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PrnpP04925 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PrnpP04925 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PrnpP04925 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PrnpP04925 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PrnpP04925 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.52□□□□□ -0.41
PrnpP04925 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
PrnpP04925 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.52□□□□□ -0.41
PrnpP04925 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PrnpP04925 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms