Protein–RNA interactions for Protein: P01728

Ig lambda-2 chain V region, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01728 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC9.47□□□□□ -0.89
P01728 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.47□□□□□ -0.89
P01728 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
P01728 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
P01728 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
P01728 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Gm7029-201ENSMUST00000173226 450 ntBASIC9.47□□□□□ -0.89
P01728 Gm27437-201ENSMUST00000183429 107 ntBASIC9.47□□□□□ -0.89
P01728 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC9.47□□□□□ -0.89
P01728 Gm43002-201ENSMUST00000200310 155 ntBASIC9.47□□□□□ -0.89
P01728 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC9.47□□□□□ -0.89
P01728 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.47□□□□□ -0.89
P01728 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC9.47□□□□□ -0.89
P01728 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Gm39404-201ENSMUST00000216350 313 ntBASIC9.47□□□□□ -0.89
P01728 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.47□□□□□ -0.89
P01728 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Gm10012-201ENSMUST00000078252 192 ntBASIC9.47□□□□□ -0.89
P01728 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC9.47□□□□□ -0.89
P01728 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
P01728 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
P01728 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.47□□□□□ -0.89
P01728 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC9.47□□□□□ -0.89
P01728 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
P01728 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P01728 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
P01728 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.46□□□□□ -0.89
P01728 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
P01728 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P01728 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P01728 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
P01728 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
P01728 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P01728 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
P01728 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.46□□□□□ -0.89
P01728 Gm37324-201ENSMUST00000194500 4504 ntBASIC9.46□□□□□ -0.89
P01728 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
P01728 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
P01728 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P01728 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P01728 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
P01728 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P01728 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.46□□□□□ -0.89
P01728 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P01728 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.46□□□□□ -0.89
P01728 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
P01728 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
P01728 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
P01728 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
P01728 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
P01728 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
P01728 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC9.46□□□□□ -0.9
P01728 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
P01728 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P01728 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC9.46□□□□□ -0.9
P01728 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
P01728 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
P01728 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.46□□□□□ -0.9
P01728 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
P01728 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
P01728 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
P01728 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
P01728 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC9.46□□□□□ -0.9
P01728 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC9.46□□□□□ -0.9
P01728 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
P01728 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC9.46□□□□□ -0.9
P01728 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P01728 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P01728 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
P01728 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
P01728 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
P01728 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
P01728 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms