Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Gm18304-201ENSMUST00000189162 546 ntBASIC11.04□□□□□ -0.64
Shisa8J3QNX5 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa8J3QNX5 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Gm12091-201ENSMUST00000146791 830 ntBASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Gm6007-201ENSMUST00000208170 823 ntBASIC11.03□□□□□ -0.64
Shisa8J3QNX5 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa8J3QNX5 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shisa8J3QNX5 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.02□□□□□ -0.64
Shisa8J3QNX5 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shisa8J3QNX5 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shisa8J3QNX5 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Shisa8J3QNX5 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.02□□□□□ -0.64
Shisa8J3QNX5 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shisa8J3QNX5 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms