Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm36970-201ENSMUST00000193688 1859 ntBASIC18.07■□□□□ 0.48
Pcf11G3X9Z4 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcf11G3X9Z4 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcf11G3X9Z4 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 AC130823.1-201ENSMUST00000228929 1549 ntBASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Gm12990-201ENSMUST00000120372 468 ntBASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Gm45120-201ENSMUST00000208880 408 ntBASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Lgi3-203ENSMUST00000226548 1001 ntBASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcf11G3X9Z4 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Gm18968-201ENSMUST00000221319 862 ntBASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Gm6722-201ENSMUST00000221586 390 ntBASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 CT573047.1-201ENSMUST00000223652 851 ntBASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Prrxl1-205ENSMUST00000228878 723 ntBASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Pcf11G3X9Z4 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Gm29410-201ENSMUST00000188383 694 ntBASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 CT025551.1-201ENSMUST00000223996 692 ntBASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Gm3793-201ENSMUST00000204973 672 ntBASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcf11G3X9Z4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 Gm37859-201ENSMUST00000195529 2173 ntBASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 CT009757.3-201ENSMUST00000223367 2320 ntBASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms