Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn2B2RVW2 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Gm14193-201ENSMUST00000105067 153 ntBASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Gm16166-201ENSMUST00000118291 787 ntBASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Gm37028-201ENSMUST00000194276 107 ntBASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Gm5714-201ENSMUST00000197343 566 ntBASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Gm6430-201ENSMUST00000054664 1248 ntBASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn2B2RVW2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14□□□□□ -0.17
Clrn2B2RVW2 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Clrn2B2RVW2 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 Gm11836-201ENSMUST00000121022 441 ntBASIC14□□□□□ -0.17
Clrn2B2RVW2 Gm13182-201ENSMUST00000122241 312 ntBASIC14□□□□□ -0.17
Clrn2B2RVW2 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC14□□□□□ -0.17
Clrn2B2RVW2 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC14□□□□□ -0.17
Clrn2B2RVW2 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14□□□□□ -0.17
Clrn2B2RVW2 Gm4034-201ENSMUST00000187674 480 ntBASIC14□□□□□ -0.17
Clrn2B2RVW2 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC14□□□□□ -0.17
Clrn2B2RVW2 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC14□□□□□ -0.17
Clrn2B2RVW2 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC14□□□□□ -0.17
Clrn2B2RVW2 AC174797.2-202ENSMUST00000225729 568 ntBASIC14□□□□□ -0.17
Clrn2B2RVW2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Clrn2B2RVW2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Clrn2B2RVW2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn2B2RVW2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14□□□□□ -0.17
Clrn2B2RVW2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn2B2RVW2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn2B2RVW2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Clrn2B2RVW2 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
Clrn2B2RVW2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Clrn2B2RVW2 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn2B2RVW2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn2B2RVW2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn2B2RVW2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn2B2RVW2 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.99□□□□□ -0.17
Clrn2B2RVW2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn2B2RVW2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn2B2RVW2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn2B2RVW2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn2B2RVW2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn2B2RVW2 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms