Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Gm15547-201ENSMUST00000122152 333 ntBASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Gm2991-201ENSMUST00000173338 480 ntBASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Gm27516-201ENSMUST00000184237 98 ntBASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Gm6621-201ENSMUST00000193251 772 ntBASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Gm19994-201ENSMUST00000217086 586 ntBASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Gm12036-201ENSMUST00000120008 530 ntBASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Gm14726-201ENSMUST00000120623 896 ntBASIC12.13□□□□□ -0.47
H2afb2S4R1M3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.13□□□□□ -0.47
H2afb2S4R1M3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Gm31256-201ENSMUST00000194705 506 ntBASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.13□□□□□ -0.47
H2afb2S4R1M3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Gm14247-201ENSMUST00000120950 237 ntBASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Gm6334-201ENSMUST00000207083 228 ntBASIC12.12□□□□□ -0.47
H2afb2S4R1M3 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.12□□□□□ -0.47
H2afb2S4R1M3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms