Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nubp2Q9R061 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nubp2Q9R061 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nubp2Q9R061 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nubp2Q9R061 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Gm24255-201ENSMUST00000104481 128 ntBASIC10.83□□□□□ -0.68
Nubp2Q9R061 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Gm27243-201ENSMUST00000183964 521 ntBASIC10.83□□□□□ -0.68
Nubp2Q9R061 Gm38092-201ENSMUST00000195600 653 ntBASIC10.83□□□□□ -0.68
Nubp2Q9R061 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.83□□□□□ -0.68
Nubp2Q9R061 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.83□□□□□ -0.68
Nubp2Q9R061 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.83□□□□□ -0.68
Nubp2Q9R061 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.83□□□□□ -0.68
Nubp2Q9R061 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nubp2Q9R061 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Gm26956-201ENSMUST00000182176 986 ntBASIC10.82□□□□□ -0.68
Nubp2Q9R061 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.82□□□□□ -0.68
Nubp2Q9R061 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.82□□□□□ -0.68
Nubp2Q9R061 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nubp2Q9R061 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.81□□□□□ -0.68
Nubp2Q9R061 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nubp2Q9R061 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nubp2Q9R061 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.81□□□□□ -0.68
Nubp2Q9R061 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nubp2Q9R061 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nubp2Q9R061 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nubp2Q9R061 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nubp2Q9R061 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nubp2Q9R061 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms