Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chaf1aQ9QWF0 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chaf1aQ9QWF0 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chaf1aQ9QWF0 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Chaf1aQ9QWF0 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chaf1aQ9QWF0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chaf1aQ9QWF0 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chaf1aQ9QWF0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Chaf1aQ9QWF0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chaf1aQ9QWF0 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chaf1aQ9QWF0 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chaf1aQ9QWF0 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.64□□□□□ -0.23
Chaf1aQ9QWF0 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.64□□□□□ -0.23
Chaf1aQ9QWF0 Gm5124-202ENSMUST00000132683 2083 ntBASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Gm13492-201ENSMUST00000119772 665 ntBASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Gm11591-201ENSMUST00000120063 702 ntBASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 AC122291.1-201ENSMUST00000228937 5748 ntBASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chaf1aQ9QWF0 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Gm4984-201ENSMUST00000115987 360 ntBASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Gm7809-201ENSMUST00000153199 742 ntBASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Gm43818-201ENSMUST00000200605 466 ntBASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms