Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lysmd1Q9D0E3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Lysmd1Q9D0E3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Mir1190-201ENSMUST00000116925 96 ntBASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Gm14227-201ENSMUST00000119431 629 ntBASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Gm25872-201ENSMUST00000177784 100 ntBASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Gm8255-201ENSMUST00000218693 305 ntBASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 CT030166.5-201ENSMUST00000222249 420 ntBASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lysmd1Q9D0E3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Prss23os-202ENSMUST00000179361 1362 ntBASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Gm22495-201ENSMUST00000104492 126 ntBASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Lysmd1Q9D0E3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Lysmd1Q9D0E3 Gm14829-201ENSMUST00000121499 1138 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms