Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Gm13549-201ENSMUST00000118339 796 ntBASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Gm3150-201ENSMUST00000166418 204 ntBASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldnd1Q9CQX5 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cldnd1Q9CQX5 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cldnd1Q9CQX5 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cldnd1Q9CQX5 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cldnd1Q9CQX5 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Cldnd1Q9CQX5 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Gm42779-201ENSMUST00000198807 406 ntBASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Gm5805-201ENSMUST00000072779 456 ntBASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldnd1Q9CQX5 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Gm25766-201ENSMUST00000104101 131 ntBASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Cldnd1Q9CQX5 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms